SubtiBank SubtiBank
yoqW [2019-07-02 11:31:37]
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yoqW [2019-07-02 11:31:37]

similar to general secretion pathway protein
locus
BSU20490
pI
4.94
mw
25.80 kDa
protein length
224 aa Sequence Blast
gene length
676 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProt

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.6|Protein secretion/ based on similarity]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

    • The protein

    Protein family

  • [SW|SOS response-associated peptidase family] (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|B01C362825EB84DAD70CAF2C2500DE7D3EE68E5C|YobE], [protein|46FCB8FC703E61ED6578DFE4D3FC01B9421F8247|YoaM]

    • Structure

  • [PDB|2F20] (from Bacteroides thetaiotamicron, 35% identity)

    • Biological materials

    Mutant

  • BKE20490 ([gene|9459834886B4943D514137F0E51536C771154183|yoqW]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE20490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCATCATCCTTTAGG, downstream forward: _UP4_TAAGTACCACTGCCATATCG
  • BKK20490 ([gene|9459834886B4943D514137F0E51536C771154183|yoqW]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK20490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCATCATCCTTTAGG, downstream forward: _UP4_TAAGTACCACTGCCATATCG